Most of these can be installed via conda packages. Noting that some tools have different samtools version expectations, which can lead to problems. In particular the bioconda install of samtools is v0 ...
1Laura and Isaac Perlmutter Cancer Center, Department of Medicine, New York University Grossman School of Medicine, NYU Langone Health, New York, New York. 9Department of Pathology, New York ...
print STDERR "\n\n\tNOTE - longest transcript isn't always the best transcript!... consider filtering based on relative expression support ... \n\n"; ...
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