Nature

Genomic analysis articles from across Nature Portfolio

Genomic analysis is the identification, measurement or comparison of genomic features such as DNA sequence, structural variation, gene expression, or regulatory and functional element annotation at a ...
GitHub

corto (Correlation Tool): an R package to generate correlation-based DPI networks.

Gene Network Inference, with DPI steps, Bootstrapping and optional CNV correction Gene Network Interrogation, via Master Regulator Analysis (MRA), with functions to visualize user-provided top ...
Frontiers

Harnessing Omic Technologies: Bioinformatics Innovations in Diagnosing Microbial Infectious Diseases

The rapid evolution of omic technologies such as spanning genomics, transcriptomics, and proteomics, is reshaping how we ...
Nature

Bioinformatics in the post-sequence era

The exponential growth in molecular sequence data started in the early 1980s when methods for DNA sequencing became widely available. The data were accumulated in databases such as GenBank, EMBL ...
Frontiers

Genomic Epidemiology and Evolution of Antimicrobial Resistance in Low-Resource Settings: A One Health Perspective

Antimicrobial resistance (AMR) research has become a major focus of global health and evolutionary bioinformatics. Despite ...

Computer scientists develop a new AI tool that rivals AlphaFold 3 in mapping RNA

The same family of artificial intelligence that powers today's image generators is now being aimed at one of biology's ...
IEEE

Statistical Analysis of Microarray Data Clustering using NMF, Spectral Clustering, Kmeans, and GMM

Abstract: In unsupervised learning literature, the study of clustering using microarray gene expression datasets has been extensively conducted with nonnegative matrix factorization (NMF), spectral ...
The Scientist

The Scientist - Home

This postdoctoral researcher develops high-resolution climate simulations to project extreme rainfall and flood risks, enhancing regional resilience planning.
C&EN

Affinity Classification of Kinase Inhibitors by Mass Spectrometric Methods and Validation Using Standard IC

‡Novartis Institutes for Biomedical Research, Cambridge. §Novartis Institutes for Biomedical Research, Basel. Article Views are the COUNTER-compliant sum of full text article downloads since November ...
jmg.bmj

Tumour characteristics provide evidence for germline mismatch repair missense variant pathogenicity

Correspondence to Dr Mary Helen Black, Bioinformatics, Ambry Genetics Corp, Aliso Viejo, CA 92656, USA; mblack{at}ambrygen.com Conclusion Our study demonstrates that when used separately or in ...
C&EN

Toward Digital Staining using Imaging Mass Spectrometry and Random Forests

Heidelberg Collaboratory for Image Processing (HCI), Interdisciplinary Center for Scientific Computing (IWR), University of Heidelberg, Speyerer Strasse 6, 69115 Heidelberg, Germany, FOM-AMOLF, ...
PNAS

Karrikins enhance light responses during germination and seedling development in Arabidopsis thaliana

Microarray analysis of imbibed Arabidopsis thaliana seeds was performed to identify transcriptional responses to KAR 1 before germination. A small set of genes that are regulated by KAR 1, even when ...