GKMKernel family — gapped k-mer kernels from gkmSVM / LS-GKM (Ghandi et al. 2014; Lee 2016). C-backed, OpenMP-parallel, with full/estimated/truncated mismatch schemes, 6 post-transforms (RBF, poly, ...
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Claude (Anthropic, Opus 4) was used to assist in the organization of ideas, language refinement, and cross-checking Python code. All outputs generated by the AI were critically reviewed, edited, and ...
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