The fastest Python implementation of the ForceAtlas2 graph layout algorithm, with Cython optimization for 10-100x speedup. Supports NetworkX, igraph, and raw adjacency matrices. ForceAtlas2 is a force ...

Parallel NKI Sequence Alignment, Kandasamy Chokkalingam & Anton Efremov Speeding Up Multiple Sequence Alignment Using Speculative Parallelism , Leon Xie & Taekseung Kim ...

Sarah B. Barnes is the former Director of the Maternal Health Initiative (MHI) at the Woodrow Wilson International Center for Scholars, in Washington, DC, where she leads the programs’ research and ...

t-distributed Stochastic Neighbour Embedding (t-SNE) is a cornerstone for visualizing high-dimensional biological data, where each high-dimensional data point is represented as a point in a ...

Abstract: This paper presents the design, implementation, and evaluation of a general-purpose simulation platform for multicellular molecular communication systems. Built on an agent-based model, the ...

This repository contains a header-only C++ library implementing the Barnes-Hut t-distributed stochastic neighbor embedding (t-SNE) algorithm (van der Maaten and Hinton, 2008; van der Maaten, 2014).

Abstract: General-purpose computation on graphics processing units (GPGPU) has become a popular field of study. Due to its high computing capacity and relatively low price, GPU has been an ideal ...

Despite the development of vaccines, which protect healthy people from severe and life-threatening Covid-19, the immunological responses of people with secondary immunodeficiencies to these vaccines ...

Dealing with a great amount of data can be time consuming, thus using Python can be very powerful to help analysts sort information and extract the most relevant data for their investigation. The open ...