Cardiogenic shock (CS) is a life-threatening condition characterized by clinical heterogeneity and high mortality. A “one-size-fits-all” approach to management may be suboptimal. We aimed to identify ...

sourmash is a tool for biological sequence analysis and comparisons. sourmash compare and sourmash plot produce basic distance matrix plots that are useful for comparing and visualizing the ...

This study investigated transcriptional profiles of midbrain dopamine neurons using single nucleus RNA (snRNA) sequencing. The authors found more nuanced subgroups of dopamine neurons than previous ...

Current visualizations in microbiome research rely on aggregations in taxonomic classifications or do not show less abundant taxa. We introduce Snowflake: a new visualization method that creates a ...

Conda will install an environment called motifscope, in which the necessary dependencies are installed. The conda environment is activated by executing conda activate motifscope in the shell. See the ...

Visualization has long been key in helping to understand biological systems, such as metabolism 1, signaling 2 and the regulation of gene expression 3. In recent years, the study of such systems has ...

A crossmapping technique is introduced for visualizing multiple and overlapping relations among entity types in collections of journal articles. Groups of entities from two entity types are ...