GitHub

A-gallery-of-interesting-IPython-Notebooks.md

This page is a curated collection of IPython notebooks that are notable for some reason. Feel free to add new content here, but please try to only include links to notebooks that include interesting ...
C&EN

Deep Learning-Assisted Peak Curation for Large-Scale LC-MS Metabolomics

Berlin Institute of Health at Charité, Metabolomics Platform, 10178 Berlin, Germany Berlin Institute of Health at Charité, Core Unit Bioinformatics, 10178 Berlin, Germany ...
Europe PMC

Whole-cell segmentation of tissue images with human-level performance using large-scale data annotation and deep learning.

A major challenge in the analysis of tissue imaging data is cell segmentation, the task of identifying the precise boundary of every cell in an image. To address this problem we constructed TissueNet, ...
GitHub

GenomeSPOT: Genome-based Salinity, pH, Oxygen Tolerance, and Temperature for Bacteria and Archaea

Predicting microbial growth conditions from amino acid composition. Tyler P. Barnum, Alexander Crits-Christoph, Michael Molla, Paul Carini, Henry H. Lee, Nili Ostrov ...