Abstract: With the development of bioinformatics, there is unprecedented progress and wide applications of DNA sequencing technology, especially in helping biological and medical researchers obtain ...
parasail is a SIMD C (C99) library containing implementations of the Smith-Waterman (local), Needleman-Wunsch (global), and various semi-global pairwise sequence alignment algorithms. Here, ...
This package contains Python bindings for parasail. Parasail is a SIMD C (C99) library containing implementations of the Smith-Waterman (local), Needleman-Wunsch (global), and semi-global pairwise ...
Extracellular matrices direct the formation of mineral constituents into self-assembled mineralized tissues. We investigate the protein and mineral constituents to better understand the underlying ...
Abstract: The genome is a rapidly evolving topic that constantly offers researchers with new biological and computational application challenges. One of the biggest challenges is biological sequence ...
Conserved RNA structures are critical for designing diagnostic and therapeutic tools for many diseases including COVID-19. However, existing algorithms are much too slow to model the global structures ...
Although practically attractive with high prediction and classification power, complicated learning methods often lack interpretability and reproducibility, limiting their scientific usage. A useful ...
To evaluate the result generated by the ZSDP approach against standard sequence alignments, we compared the genome annotation files with RNA-seq results using Cufflinks v2.2.1 (Trapnell et al., 2012).
It was a double shock on The Apprentice this week as resident 'pantomime villain' Selina Waterman Smith was fired and Scott Saunders sensationally quit the show. Week nine saw the eight remaining ...
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